Use this page to provide a link between a biological entity with an external database. This will allow to generate a link of this entity with the external database. The format of a file containing the external links is described below. This information is added into B-NET database.
The following are the list of columns allowed on the file :
Column Heading | What to store in each column | Column - Required or Optional |
---|---|---|
Name | Name of the biological entity | Required |
External_Database | The name of the external database to which you want to link this entity | Required |
External_id | The ID for this entity used by the external database | Optional |
NOTE: The external_id is required to dynamically link this biological entity to the external database.
An example of a file is as follows:
Name | External_Database | External_id |
---|---|---|
beta-D-glucose | LIGAND database in KEGG | C00031 |
beta-D-glucose | CAS | 50-99-7 |
D-glucono-1,5-lactone | LIGAND database in KEGG | C00198 |
D-glucono-1,5-lactone | CAS | 90-80-2 |
D-galactose | LIGAND database in KEGG | C00124 |
D-galactose | CAS | 59-23-4 |
The "External_Database" name must match the database name already existing in B-NET. If you are not sure then please check the list of existing database using the "View/Edit External Database" page. If the database of your choice does not exist there, then please add that information using the "Add External Database" page
Please also choose a biological entity which best describes the data in the file attached.
File name:
Please name your files using only the following characters “a–z”, “A–Z”, “0–9” and “_”. Connect parts of the name with underscores.