updated October 28, 2007

Software for Artificial Gene Networks

The generation of artificial gene networks and their use to produce dynamical or steady state data was automated with a series of related programs. The software created is not a polished suite but rather a set of prototype programs in C++ and PERL. Software is not available at this time but may be in the future if it is improved to be a more robust software suite. In particular, a future version to be released would make direct use of our modern simulator COPASI.

The process of creation of a network and derived data works in the following way:

Re-iterating: the software is not currently available. Future versions may be made available here, in which case they will run with COPASI and files will be written in SBML level 2.